The Pepitope Server

Server for epitope mapping using affinity-selected peptides


Epitope Mapping Algorithm


Protein Structure
Enter a PDB ID
OR
Upload your own PDB file
Indicate the chain identifier

Peptides file in FASTA
Paste here the peptide sequences
OR
Upload peptide sequences file

Please enter your e-mail address
As soon as the result is ready, a link will be sent to the e-mail address provided.





Advanced Options
PepSurf Options
Substitution matrix
Gap penalty
(Enter a negative number between 0 to -100)
Probability for obtaining the best path
(Enter a number between 0 and 1)
Mapitope Options
Distance threshold
Enter a number between 4 and 24
Statistical threshold
Enter a positive number
Maximum gap "fill-in"
Enter a non-negative number

Phage-Display Library Properties
Library type

Stop codon modification
Codon
Amino Acid







When using the Pepitope server you agree upon these terms and conditions.